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JIRA Software v7.13.1#713001-sha1:5e06076 takes on Ubuntu 16.04.5 sheer endless amount starttime

Peter Dyballa February 7, 2019

JIRA runs with Java 1.8.0_201. In catalina.log I can see

 

07-Feb-2019 11:10:53.760 SEVERE [main] org.apache.catalina.core.StandardService.startInternal Failed to start connector [Connector[HTTP/1.1-8080]]

 org.apache.catalina.LifecycleException: Failed to start component [Connector[HTTP/1.1-8080]]

        at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:167)

        at org.apache.catalina.core.StandardService.startInternal(StandardService.java:440)

        at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:150)

        at org.apache.catalina.core.StandardServer.startInternal(StandardServer.java:793)

        at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:150)

        at org.apache.catalina.startup.Catalina.start(Catalina.java:681)

        at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)

        at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)

        at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)

        at java.lang.reflect.Method.invoke(Method.java:498)

        at org.apache.catalina.startup.Bootstrap.start(Bootstrap.java:353)

        at org.apache.catalina.startup.Bootstrap.main(Bootstrap.java:493)

Caused by: org.apache.catalina.LifecycleException: Protocol handler start failed

        at org.apache.catalina.connector.Connector.startInternal(Connector.java:1020)

        at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:150)

        ... 11 more

Caused by: java.net.BindException: Die Adresse wird bereits verwendet

        at sun.nio.ch.Net.bind0(Native Method)

        at sun.nio.ch.Net.bind(Net.java:433)

        at sun.nio.ch.Net.bind(Net.java:425)

        at sun.nio.ch.ServerSocketChannelImpl.bind(ServerSocketChannelImpl.java:223)

        at sun.nio.ch.ServerSocketAdaptor.bind(ServerSocketAdaptor.java:74)

        at org.apache.tomcat.util.net.NioEndpoint.bind(NioEndpoint.java:210)

        at org.apache.tomcat.util.net.AbstractEndpoint.start(AbstractEndpoint.java:1150)

        at org.apache.coyote.AbstractProtocol.start(AbstractProtocol.java:591)

        at org.apache.catalina.connector.Connector.startInternal(Connector.java:1018)

        ... 12 more

 

07-Feb-2019 11:10:53.772 INFORMATION [main] org.apache.coyote.AbstractProtocol.start Starting ProtocolHandler ["ajp-nio-8010"]

Server startup in 44565 ms

In atlassian-greenhopper.log I can see (almost) hundreds of versioned JIRA Agile files start, setenv.sh has

JVM_SUPPORT_RECOMMENDED_ARGS="-Datlassian.plugins.enable.wait=600"

  In the end the Dashboard is not build and this error is reported:

An error occurredHide…(2)

Please try refreshing the page, or contact your administrator / Atlassian Support if the problem continues.

Details
    • Exception: TypeError: undefined is not an object (evaluating 'b.Body.issueBody')
    • Resource: https://jira.webmiles.biz/s/9588e7f84dbb178808b0536c590319ae-CDN/-d7mxfe/713001/b6b48b2829824b869586ac216d119363/bada99e5e131728735fe0d0b9dab143d/_/download/contextbatch/js/com.pyxis.greenhopper.jira:gh-rapid-inline-editable,-_super,-greenhopper-rapid-non-gadget,-atl.general,-gh-manage-boards/batch.js?agile_global_admin_condition=true&baseurl-check-resources=true&healthcheck-resources=true&is-server-instance=true&is-system-admin=true&jag=true&jaguser=true&locale=de-DE&nps-acknowledged=true&nps-not-opted-out=true&whisper-enabled=true
    • Line: 502
    • Column: 492
    • Exception: Error: No jira-agile/rapid/ui/detail/inlineedit/issue-detail-view-inline-editor
    • Resource: https://jira.webmiles.biz/s/b67f5241ec8db537290f50d0fc81ff09-CDN/-d7mxfe/713001/b6b48b2829824b869586ac216d119363/18171e35163e0d97a43f61d14a2eb280/_/download/contextbatch/js/_super/batch.js?locale=de-DE
    • Line: 25
    • Column: 1001
Environment

Mozilla/5.0 (Macintosh; Intel Mac OS X 10_13_6) AppleWebKit/605.1.15 (KHTML, like Gecko) Version/12.2 Safari/605.1.15

Stack trace
  • https://jira.webmiles.biz/s/9588e7f84dbb178808b0536c590319ae-CDN/-d7mxfe/713001/b6b48b2829824b869586ac216d119363/bada99e5e131728735fe0d0b9dab143d/_/download/contextbatch/js/com.pyxis.greenhopper.jira:gh-rapid-inline-editable,-_super,-greenhopper-rapid-non-gadget,-atl.general,-gh-manage-boards/batch.js?agile_global_admin_condition=true&baseurl-check-resources=true&healthcheck-resources=true&is-server-instance=true&is-system-admin=true&jag=true&jaguser=true&locale=de-DE&nps-acknowledged=true&nps-not-opted-out=true&whisper-enabled=true:502:492
  • l@https://jira.webmiles.biz/s/b67f5241ec8db537290f50d0fc81ff09-CDN/-d7mxfe/713001/b6b48b2829824b869586ac216d119363/18171e35163e0d97a43f61d14a2eb280/_/download/contextbatch/js/_super/batch.js?locale=de-DE:25:2049
  • u@https://jira.webmiles.biz/s/b67f5241ec8db537290f50d0fc81ff09-CDN/-d7mxfe/713001/b6b48b2829824b869586ac216d119363/18171e35163e0d97a43f61d14a2eb280/_/download/contextbatch/js/_super/batch.js?locale=de-DE:25:951
  • s@https://jira.webmiles.biz/s/b67f5241ec8db537290f50d0fc81ff09-CDN/-d7mxfe/713001/b6b48b2829824b869586ac216d119363/18171e35163e0d97a43f61d14a2eb280/_/download/contextbatch/js/_super/batch.js?locale=de-DE:25:2325
  • https://jira.webmiles.biz/s/b67f5241ec8db537290f50d0fc81ff09-CDN/-d7mxfe/713001/b6b48b2829824b869586ac216d119363/18171e35163e0d97a43f61d14a2eb280/_/download/contextbatch/js/_super/batch.js?locale=de-DE:25:760
  • https://jira.webmiles.biz/s/9588e7f84dbb178808b0536c590319ae-CDN/-d7mxfe/713001/b6b48b2829824b869586ac216d119363/bada99e5e131728735fe0d0b9dab143d/_/download/contextbatch/js/com.pyxis.greenhopper.jira:gh-rapid-inline-editable,-_super,-greenhopper-rapid-non-gadget,-atl.general,-gh-manage-boards/batch.js?agile_global_admin_condition=true&baseurl-check-resources=true&healthcheck-resources=true&is-server-instance=true&is-system-admin=true&jag=true&jaguser=true&locale=de-DE&nps-acknowledged=true&nps-not-opted-out=true&whisper-enabled=true:523:109
  • l@https://jira.webmiles.biz/s/b67f5241ec8db537290f50d0fc81ff09-CDN/-d7mxfe/713001/b6b48b2829824b869586ac216d119363/18171e35163e0d97a43f61d14a2eb280/_/download/contextbatch/js/_super/batch.js?locale=de-DE:25:2049
  • u@https://jira.webmiles.biz/s/b67f5241ec8db537290f50d0fc81ff09-CDN/-d7mxfe/713001/b6b48b2829824b869586ac216d119363/18171e35163e0d97a43f61d14a2eb280/_/download/contextbatch/js/_super/batch.js?locale=de-DE:25:951
  • s@https://jira.webmiles.biz/s/b67f5241ec8db537290f50d0fc81ff09-CDN/-d7mxfe/713001/b6b48b2829824b869586ac216d119363/18171e35163e0d97a43f61d14a2eb280/_/download/contextbatch/js/_super/batch.js?locale=de-DE:25:2325
  • https://jira.webmiles.biz/s/b67f5241ec8db537290f50d0fc81ff09-CDN/-d7mxfe/713001/b6b48b2829824b869586ac216d119363/18171e35163e0d97a43f61d14a2eb280/_/download/contextbatch/js/_super/batch.js?locale=de-DE:25:760
  • https://jira.webmiles.biz/s/9588e7f84dbb178808b0536c590319ae-CDN/-d7mxfe/713001/b6b48b2829824b869586ac216d119363/bada99e5e131728735fe0d0b9dab143d/_/download/contextbatch/js/com.pyxis.greenhopper.jira:gh-rapid-inline-editable,-_super,-greenhopper-rapid-non-gadget,-atl.general,-gh-manage-boards/batch.js?agile_global_admin_condition=true&baseurl-check-resources=true&healthcheck-resources=true&is-server-instance=true&is-system-admin=true&jag=true&jaguser=true&locale=de-DE&nps-acknowledged=true&nps-not-opted-out=true&whisper-enabled=true:565:305
  • l@https://jira.webmiles.biz/s/b67f5241ec8db537290f50d0fc81ff09-CDN/-d7mxfe/713001/b6b48b2829824b869586ac216d119363/18171e35163e0d97a43f61d14a2eb280/_/download/contextbatch/js/_super/batch.js?locale=de-DE:25:2049
  • u@https://jira.webmiles.biz/s/b67f5241ec8db537290f50d0fc81ff09-CDN/-d7mxfe/713001/b6b48b2829824b869586ac216d119363/18171e35163e0d97a43f61d14a2eb280/_/download/contextbatch/js/_super/batch.js?locale=de-DE:25:951
  • s@https://jira.webmiles.biz/s/b67f5241ec8db537290f50d0fc81ff09-CDN/-d7mxfe/713001/b6b48b2829824b869586ac216d119363/18171e35163e0d97a43f61d14a2eb280/_/download/contextbatch/js/_super/batch.js?locale=de-DE:25:2325
  • require@https://jira.webmiles.biz/s/b67f5241ec8db537290f50d0fc81ff09-CDN/-d7mxfe/713001/b6b48b2829824b869586ac216d119363/18171e35163e0d97a43f61d14a2eb280/_/download/contextbatch/js/_super/batch.js?locale=de-DE:28:205
  • global code@https://jira.webmiles.biz/s/9588e7f84dbb178808b0536c590319ae-CDN/-d7mxfe/713001/b6b48b2829824b869586ac216d119363/bada99e5e131728735fe0d0b9dab143d/_/download/contextbatch/js/com.pyxis.greenhopper.jira:gh-rapid-inline-editable,-_super,-greenhopper-rapid-non-gadget,-atl.general,-gh-manage-boards/batch.js?agile_global_admin_condition=true&baseurl-check-resources=true&healthcheck-resources=true&is-server-instance=true&is-system-admin=true&jag=true&jaguser=true&locale=de-DE&nps-acknowledged=true&nps-not-opted-out=true&whisper-enabled=true:851:57


 What can I do to find and fix the actual error? Or should I better run an earlier version from a snapshot?

 

--

 

Pete

2 answers

1 accepted

0 votes
Answer accepted
Andy Heinzer
Atlassian Team
Atlassian Team members are employees working across the company in a wide variety of roles.
February 19, 2019

Hi Pete,
Thanks for the log files, I took a look through these and I found a few things that we probably need to address here. In this specific reply, I'm focusing on the 7.13.1 support zip file you sent:

First there are a number of instance of "FAILED PLUGIN REPORT" showing both failed plugins and other plugin artifacts that can't be resolved. Failed to load:

/srv/jira/plugins/installed-plugins/hipchat-for-jira-plugin-7.8.29.jar

^ this is an old bundled plugin for Jira that isn't bundled any longer in Jira 7.13.1. It should be probably be removed.

But then the logs go on about other plugin problems at startup:

20 plugins are unaccounted for.
Unaccounted for plugins load as artifacts but fail to resolve into full plugins.

/srv/jira/plugins/installed-plugins/jira-software-language-pack-zh_CN-7.13.1.v20190129001300.jar

^ these are mostly language packs, but there are also a few bundled system plugins here too, such as:

/opt/atlassian-jira-software-7.13.1-standalone/atlassian-jira/WEB-INF/atlassian-bundled-plugins/jira-importers-redmine-plugin-2.1.9.jar
/opt/atlassian-jira-software-7.13.1-standalone/atlassian-jira/WEB-INF/atlassian-bundled-plugins/jira-importers-bitbucket-plugin-1.0.19.jar
/opt/atlassian-jira-software-7.13.1-standalone/atlassian-jira/WEB-INF/atlassian-bundled-plugins/jira-importers-github-plugin-3.0.3.jar
/opt/atlassian-jira-software-7.13.1-standalone/atlassian-jira/WEB-INF/atlassian-bundled-plugins/jira-ical-feed-1.4.7.jar

^ some of these Jira might be able to run without, but others could actually be required for Jira to work.

Immediately after that report is this error:

2019-02-13 12:41:47,123 ForkJoinPool.commonPool-worker-1 ERROR [c.a.j.cache.soy.SoyCacheWarmer] Caught exception while compiling soy template
com.atlassian.soy.renderer.SoyException: Unable to compile Soy templates at: com.atlassian.jira.jira-issue-nav-plugin:issuenav-common

Which is more confirmation to me that we have plugins failing to load that Jira needs.   You can find very similar errors in the KBs of:

When Jira has plugins that fail to load a number of times, it can set a flag in the database to prevent trying to load these again. That mechanism usually helps to keep 3rd party plugins from completely crippling Jira, however in your case, I'm suspecting that it might have actually disabled system plugins that Jira genuinely requires to run correctly.

It looks like your installation also has a number of old plugin versions. This can happen over time as it looks like you have upgraded this installation many times since version 4.0. Some of these plugins could be benign, but others are known to cause problems in the newer Jira versions.

 

My suggested approach here is to try to address all the possible causes for this plugin loading failures at once.  What I would recommend here would be increase the Xmx in Jira to 2048m up from the default you have of 768m, clear the user plugins from being loaded, and then clear out via SQL the flags Jira might have set to disable specific plugins. Specifically try these steps here:

  1. Stop Jira
  2. Increase the memory Jira can use to 2g or 2048m per Increasing memory in Jira
  3. Go into your /srv/jira/plugins/installed-plugins/ I recommend moving all the contents of this directory (but leave the directory itself) into a temp directory outside your $JIRAHOME directory for the time being
  4. In the SQL database for Jira, run the command
    truncate table pluginstate;
    This will remove all entries from that specific table in the database that might have been disabling system plugins from loading at startup. Since we have also removed all the user plugins into the temp directory (in step #3), Jira should then be able to load all the system plugins needed to startup correctly.
  5. Start Jira again
  6. Then use the UPM (universal plugin manager) in Jira in order to reinstall the plugins you need from our marketplace.  Using the UPM to do this will help prevent you from installing plugins you don't need and only will install compatible plugins with your Jira version as found in Marketplace listings. The only problem with this is that your Jira server needs to access the internet to reach out marketplace site.   You can also reinstall Jira Service Desk or Software by going to System -> Applications -> Licenses and Versions. There should be the ability to install the corresponding version of these 'apps' into your Jira site.
  7. You will probably be prompted to reindex Jira after installing all these plugins again.  You should be ok to install all the plugins and then just reindex once.


Once you do those steps, I would expect Jira to be running considerably better here by loading the needed plugins, not loading the old relic plugins, and it should have more than sufficient memory give the size of your Jira data.

If not, I'd be interested to gather another support zip, and if you could, please include the application.xml in addition to the logs?  It provides some more environmental details that can help us to understand if the system has appropriate resources like number of CPU Cores, amount of system memory, etc.

Please try these steps and let me know the results.
Andy

Peter Dyballa February 20, 2019

Hello Andy!

In the four sub-directories

drwxr-xr-x 2 jira jira 4096 Apr 3 2017 .bundled-plugins/
drwxr-xr-x 2 jira jira 4096 Jan 31 12:56 install-app-info/
drwxr-xr-x 2 jira jira 4096 Feb 14 11:15 installed-plugins/
drwxr-xr-x 5 jira jira 4096 Apr 3 2017 .osgi-plugins/

282 JAR files can be found. Couldn't JIRA be so clever to remove old scrap?

Anyway, I already thought of removing a few plugins, like those for HipChat or Bitbucket use that are not used here.

 

A file "application.xml" does not exist here.

I'll proceed to solve the problem!

--

Greetings

   Pete

Peter Dyballa February 20, 2019

Thank you very much, Andy!

Instead of 282 not so well working plugins we have now 381 of them, or more exactly, of working plugins. There is only one problem left with the application link to Crowd which failed again some time ago and cannot be restored.

Similarly Fisheye/Crucible 4.6.1 reports ("The server returned a bad response.")

No remote application link

We can't connect with webmiles Crowd because a reciprocal application link is missing on that server. You'll need to delete and then re-create this application link.

 

Bamboo 6.7.2 cannot establish link to Fisheye/Crucible (but Fisheye/Crucible can connect to Bamboo), except under the application name "scm", and Crowd 3.3.3.

 

Confluence 6.14.0 cannot establish link to Crowd 3.3.3 (on the same server, as is JIRA).

 

JIRA Software 7.13.1 works fine now. It uses 680 MB of RAM and has 1,140 other MB free for use. I think the 2 GB are too big…

--

Greetings

   Pete

0 votes
Andy Heinzer
Atlassian Team
Atlassian Team members are employees working across the company in a wide variety of roles.
February 8, 2019

Your error message of

Caused by: java.net.BindException: Die Adresse wird bereits verwendet

Indicates that this attempt to start Jira actually failed because the network address is already in use.  This would tend to indicate that another process or instance of Jira is already running on the same port number.   Did you recently try to upgrade Jira? 

If you did this in a manner where you created a new install directory for Jira, and then imported your Jira Home and other data, it could be that the old Jira service is still running on this same server.   From a linux environment, like Ubuntu, you might try a terminal statement such as:

ps -ax | grep jira

or

ps -ax | grep java

Either should be able to show you all the running processes for Jira or Java (which Jira uses to run).   That should at least help identify if you have more than one application with the same name running.

 

As for the long startup times, again, if this is an upgrade, it's very common to see the $JIRAINSTALL/bin/setenv.sh file get overwritten by an upgrade.  If this happens, it defaults to using the 768m for the Xmx parameter (the max memory Jira can use in Java heap).   You might want to return to the Increasing Jira memory documentation and the Jira Sizing Guide to increase this appropriately for your environment.

Peter Dyballa February 12, 2019

Hello Andrew!

It's terribly unlikely that another JIRA Software is running. The server is restarted every morning (to save some money and waste less energy) by SystemD. If JIRA starts itself twice, then this can be true. (It can also be true that JIRA emits some signal and SystemD thinks a fault has happened and restarts JIRA without stopping it first…)

Also during preparation of the upgrade setenv.sh is updated.

The bar JIRA shows when it starts stays for minutes around 75 or 80 %. And after the timeout has happened an empty dashboard is shown.

Does it play a role that we are using an Apache proxy to access JIRA (and othe Atlassian products)?

--

Greetings

   Pete

Andy Heinzer
Atlassian Team
Atlassian Team members are employees working across the company in a wide variety of roles.
February 12, 2019

It might be possible that a proxy could effect the page load times negatively, but you could try to direct connect to Jira and bypass a proxy in place to test against this.

If you get the same results, it's probably safe to say that the proxy is not the cause here.  I can't help but suspect that your environment might be failing to load up some system plugins for Jira at startup.  If that happens Jira can behave unexpectedly.  But it's difficult to diagnose without looking more closely at the support zip or other logs from the $JIRAHOME/log/ folder.

Could you try to gather that support zip, and then host it somewhere like dropbox or google drive and share the link with us here?

I'd be happy to take a closer look if you can.   If not, just let me know and perhaps we can investigate this another way.

Peter Dyballa February 13, 2019

Hello Andrew!

I think with JIRA Software v7.9.2#79002-sha1:3bb15b6 I have the same problem (with 7.8.1 it was not there). This version reports when I visit the Boards page:

 

An error occurredHide…(2)

Please try refreshing the page, or contact your administrator / Atlassian Support if the problem continues.

Details
    • Exception: TypeError: undefined is not an object (evaluating 'b.Body.issueBody')
    • Resource: https://jira.webmiles.biz/s/082b20298569011df24992342e4dfa6f-T/acrlb3/79002/b6b48b2829824b869586ac216d119363/b5120ddfe2488ad026e90651523bfd52/_/download/contextbatch/js/com.pyxis.greenhopper.jira:gh-rapid-inline-editable,-_super,-greenhopper-rapid-non-gadget,-atl.general,-gh-manage-boards/batch.js?agile_global_admin_condition=true&baseurl-check-resources=true&healthcheck-resources=true&is-server-instance=true&is-system-admin=true&jag=true&jaguser=true&locale=de-DE&nps-acknowledged=true&nps-not-opted-out=true&whisper-enabled=true
    • Line: 502
    • Column: 492
    • Exception: Error: No jira-agile/rapid/ui/detail/inlineedit/issue-detail-view-inline-editor
    • Resource: https://jira.webmiles.biz/s/f76fdb0227b322c207c3874ca4aaa6e9-CDN/acrlb3/79002/b6b48b2829824b869586ac216d119363/ec4c7026e785f91221e62339fae9bf24/_/download/contextbatch/js/_super/batch.js?locale=de-DE
    • Line: 25
    • Column: 1001
Environment

Mozilla/5.0 (Macintosh; Intel Mac OS X 10_13_6) AppleWebKit/605.1.15 (KHTML, like Gecko) Version/12.2 Safari/605.1.15

Stack trace
  • https://jira.webmiles.biz/s/082b20298569011df24992342e4dfa6f-T/acrlb3/79002/b6b48b2829824b869586ac216d119363/b5120ddfe2488ad026e90651523bfd52/_/download/contextbatch/js/com.pyxis.greenhopper.jira:gh-rapid-inline-editable,-_super,-greenhopper-rapid-non-gadget,-atl.general,-gh-manage-boards/batch.js?agile_global_admin_condition=true&baseurl-check-resources=true&healthcheck-resources=true&is-server-instance=true&is-system-admin=true&jag=true&jaguser=true&locale=de-DE&nps-acknowledged=true&nps-not-opted-out=true&whisper-enabled=true:502:492
  • l@https://jira.webmiles.biz/s/f76fdb0227b322c207c3874ca4aaa6e9-CDN/acrlb3/79002/b6b48b2829824b869586ac216d119363/ec4c7026e785f91221e62339fae9bf24/_/download/contextbatch/js/_super/batch.js?locale=de-DE:25:2049
  • u@https://jira.webmiles.biz/s/f76fdb0227b322c207c3874ca4aaa6e9-CDN/acrlb3/79002/b6b48b2829824b869586ac216d119363/ec4c7026e785f91221e62339fae9bf24/_/download/contextbatch/js/_super/batch.js?locale=de-DE:25:951
  • s@https://jira.webmiles.biz/s/f76fdb0227b322c207c3874ca4aaa6e9-CDN/acrlb3/79002/b6b48b2829824b869586ac216d119363/ec4c7026e785f91221e62339fae9bf24/_/download/contextbatch/js/_super/batch.js?locale=de-DE:25:2325
  • https://jira.webmiles.biz/s/f76fdb0227b322c207c3874ca4aaa6e9-CDN/acrlb3/79002/b6b48b2829824b869586ac216d119363/ec4c7026e785f91221e62339fae9bf24/_/download/contextbatch/js/_super/batch.js?locale=de-DE:25:760
  • https://jira.webmiles.biz/s/082b20298569011df24992342e4dfa6f-T/acrlb3/79002/b6b48b2829824b869586ac216d119363/b5120ddfe2488ad026e90651523bfd52/_/download/contextbatch/js/com.pyxis.greenhopper.jira:gh-rapid-inline-editable,-_super,-greenhopper-rapid-non-gadget,-atl.general,-gh-manage-boards/batch.js?agile_global_admin_condition=true&baseurl-check-resources=true&healthcheck-resources=true&is-server-instance=true&is-system-admin=true&jag=true&jaguser=true&locale=de-DE&nps-acknowledged=true&nps-not-opted-out=true&whisper-enabled=true:523:109
  • l@https://jira.webmiles.biz/s/f76fdb0227b322c207c3874ca4aaa6e9-CDN/acrlb3/79002/b6b48b2829824b869586ac216d119363/ec4c7026e785f91221e62339fae9bf24/_/download/contextbatch/js/_super/batch.js?locale=de-DE:25:2049
  • u@https://jira.webmiles.biz/s/f76fdb0227b322c207c3874ca4aaa6e9-CDN/acrlb3/79002/b6b48b2829824b869586ac216d119363/ec4c7026e785f91221e62339fae9bf24/_/download/contextbatch/js/_super/batch.js?locale=de-DE:25:951
  • s@https://jira.webmiles.biz/s/f76fdb0227b322c207c3874ca4aaa6e9-CDN/acrlb3/79002/b6b48b2829824b869586ac216d119363/ec4c7026e785f91221e62339fae9bf24/_/download/contextbatch/js/_super/batch.js?locale=de-DE:25:2325
  • https://jira.webmiles.biz/s/f76fdb0227b322c207c3874ca4aaa6e9-CDN/acrlb3/79002/b6b48b2829824b869586ac216d119363/ec4c7026e785f91221e62339fae9bf24/_/download/contextbatch/js/_super/batch.js?locale=de-DE:25:760
  • https://jira.webmiles.biz/s/082b20298569011df24992342e4dfa6f-T/acrlb3/79002/b6b48b2829824b869586ac216d119363/b5120ddfe2488ad026e90651523bfd52/_/download/contextbatch/js/com.pyxis.greenhopper.jira:gh-rapid-inline-editable,-_super,-greenhopper-rapid-non-gadget,-atl.general,-gh-manage-boards/batch.js?agile_global_admin_condition=true&baseurl-check-resources=true&healthcheck-resources=true&is-server-instance=true&is-system-admin=true&jag=true&jaguser=true&locale=de-DE&nps-acknowledged=true&nps-not-opted-out=true&whisper-enabled=true:565:305
  • l@https://jira.webmiles.biz/s/f76fdb0227b322c207c3874ca4aaa6e9-CDN/acrlb3/79002/b6b48b2829824b869586ac216d119363/ec4c7026e785f91221e62339fae9bf24/_/download/contextbatch/js/_super/batch.js?locale=de-DE:25:2049
  • u@https://jira.webmiles.biz/s/f76fdb0227b322c207c3874ca4aaa6e9-CDN/acrlb3/79002/b6b48b2829824b869586ac216d119363/ec4c7026e785f91221e62339fae9bf24/_/download/contextbatch/js/_super/batch.js?locale=de-DE:25:951
  • s@https://jira.webmiles.biz/s/f76fdb0227b322c207c3874ca4aaa6e9-CDN/acrlb3/79002/b6b48b2829824b869586ac216d119363/ec4c7026e785f91221e62339fae9bf24/_/download/contextbatch/js/_super/batch.js?locale=de-DE:25:2325
  • require@https://jira.webmiles.biz/s/f76fdb0227b322c207c3874ca4aaa6e9-CDN/acrlb3/79002/b6b48b2829824b869586ac216d119363/ec4c7026e785f91221e62339fae9bf24/_/download/contextbatch/js/_super/batch.js?locale=de-DE:28:205
  • global code@https://jira.webmiles.biz/s/082b20298569011df24992342e4dfa6f-T/acrlb3/79002/b6b48b2829824b869586ac216d119363/b5120ddfe2488ad026e90651523bfd52/_/download/contextbatch/js/com.pyxis.greenhopper.jira:gh-rapid-inline-editable,-_super,-greenhopper-rapid-non-gadget,-atl.general,-gh-manage-boards/batch.js?agile_global_admin_condition=true&baseurl-check-resources=true&healthcheck-resources=true&is-server-instance=true&is-system-admin=true&jag=true&jaguser=true&locale=de-DE&nps-acknowledged=true&nps-not-opted-out=true&whisper-enabled=true:810:57

     

I'll create a support.zip file from this version. Afterwards I'll try to attach the older volume with JIRA Software v7.13.1#713001-sha1:5e06076 and create another support.zip file. Between I'll see whether I can get direct access. Dropbox would be an option.

--

Greetings

   Pete

Peter Dyballa February 13, 2019

I am not having success trying to bypass the Apache proxy, could be Amazon's Security Group settings interfere although I allowed port 8080 from the original server.xml file.

--

Pete

Peter Dyballa February 13, 2019

SSLPoke fails:

$JAVA_HOME/bin/java SSLPoke jira.webniles.biz 443

java.net.UnknownHostException: jira.webniles.biz

at java.net.AbstractPlainSocketImpl.connect(AbstractPlainSocketImpl.java:184)

at java.net.SocksSocketImpl.connect(SocksSocketImpl.java:392)

at java.net.Socket.connect(Socket.java:589)

at sun.security.ssl.SSLSocketImpl.connect(SSLSocketImpl.java:666)

at sun.security.ssl.SSLSocketImpl.<init>(SSLSocketImpl.java:426)

at sun.security.ssl.SSLSocketFactoryImpl.createSocket(SSLSocketFactoryImpl.java:88)

at SSLPoke.main(SSLPoke.java:25)

but there is no IPtables filtering happening, nothing has changed in Ubuntu since updating from JIRA 7.8.1:

 

iptables -L

Chain INPUT (policy ACCEPT)

target     prot opt source               destination         

 

Chain FORWARD (policy ACCEPT)

target     prot opt source               destination         

 

Chain OUTPUT (policy ACCEPT)

target     prot opt source               destination    

 

--

Pete

Peter Dyballa February 13, 2019

SSLPoke works! It's me who is not working: used jira.web*n*iles.biz instead of jira.web*m*iles.biz. With the correct IP name SSLPoke returns:

 

Successfully connected

--

Pete

Peter Dyballa February 13, 2019

Returning back to JIRA Software v7.8.1#78001-sha1:0c6698b with an up-to-date Ubuntu (4.4.0-1075-aws #85-Ubuntu SMP Thu Jan 17 17:15:12 UTC 2019) shows a new error with Gadget-Feed-URL … This must have been introduced since 4.4.0-1074-aws    #84-Ubuntu SMP Thu Dec  6 08:57:58 UTC 2018 – then I did not have this failure.

--

Pete

Peter Dyballa February 14, 2019

I have prepared four startup volumes in Amazon EC2, prepared with JIRA Software versions 7.8.1, 7.9.2, 7.10.1, and 7.13.1. None of them works, displays the contents of the System Dashboard, except 7.8.1. I have also prepared Support ZIP files from them and I have a working DropBox. All I need is your eMail address to give you access.

--

Pete

Peter Dyballa February 18, 2019

In JIRA 7.9.2's log file I can see some spy software acting:

ajp-nio-8010-exec-1 ERROR anonymous 701x1x1 - 176.199.92.128 /secure/johnson/data [c.atlassian.instrumentation.Instrument] Unable to snapshot thread local operations (implementation of OpTimerFactory is not a ThreadLocalOpTimerFactory): null
ajp-nio-8010-exec-1 WARN anonymous 701x1x1 - 176.199.92.128 /secure/johnson/data [c.a.jira.security.JiraSecurityFilter] Rejecting security-sensitive request that bypassed Johnson filter: /secure/johnson/data

ajp-nio-8010-exec-3 WARN anonymous 701x3x1 - 176.199.92.128 /secure/johnson/data [c.a.jira.security.JiraSecurityFilter] Rejecting security-sensitive request that bypassed Johnson filter: /secure/johnson/data
ajp-nio-8010-exec-4 WARN anonymous 701x4x1 - 176.199.92.128 /secure/johnson/data [c.a.jira.security.JiraSecurityFilter] Rejecting security-sensitive request that bypassed Johnson filter: /secure/johnson/data
2019-02-14 11:42:04,030 ajp-nio-8010-exec-5 WARN anonymous 702x5x1 - 176.199.92.128 /secure/johnson/data [c.a.jira.security.JiraSecurityFilter] Rejecting security-sensitive request that bypassed Johnson filter: /secure/johnson/data
ajp-nio-8010-exec-6 WARN anonymous 702x6x1 - 176.199.92.128 /secure/johnson/data [c.a.jira.security.JiraSecurityFilter] Rejecting security-sensitive request that bypassed Johnson filter: /secure/johnson/data
ajp-nio-8010-exec-7 WARN anonymous 702x7x1 - 176.199.92.128 /secure/johnson/data [c.a.jira.security.JiraSecurityFilter] Rejecting security-sensitive request that bypassed Johnson filter: /secure/johnson/data

Since security rules prohibit communition to hosts with arbitrary IP adress over arbitrary ports it's no wonder that JIRA does not work. It would be better when Atlassian would provide a hash and a GPG signature when downloading software to check that it has not been corrupted underway.

--

Pete

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